STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104932480Deoxycitidine kinase. (268 aa)    
Predicted Functional Partners:
cda
Cytidine deaminase.
    
 0.962
LOC104927619
Cytidine deaminase.
    
 0.962
dctd
Deoxycytidylate deaminase.
   
 0.958
adsl
Adenylosuccinate lyase.
    
 0.932
cmpk1
UMP-CMP kinase.
   
 
 0.931
aprt
Adenine phosphoribosyltransferase.
  
 
 0.928
ada
Adenosine deaminase.
     
 0.918
ak3
GTP:AMP phosphotransferase AK3, mitochondrial.
   
 
 0.916
Dctpp1
DCTP pyrophosphatase 1.
     
 0.916
dguok
Deoxyguanosine kinase, mitochondrial isoform X1.
  
 
 
0.914
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.