STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brms1lBRMS1 like transcriptional repressor. (325 aa)    
Predicted Functional Partners:
arid4b
AT-rich interactive domain-containing protein 4B isoform X1.
   
 0.982
arid4a
AT-rich interactive domain-containing protein 4A.
   
 0.982
sap30l
Histone deacetylase complex subunit SAP30L.
   
 0.873
sap18
Histone deacetylase complex subunit SAP18.
     
 0.728
hdac3
Histone deacetylase 3.
   
 0.723
LOC104920778
Probable histone deacetylase 1-B.
   
 0.721
HDAC1
Probable histone deacetylase 1-B isoform X2.
   
 0.721
HDAC2
Histone deacetylase 2 isoform X1.
   
 0.719
hdac8
Histone deacetylase 8 isoform X1.
   
 0.719
sin3a
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
   
 0.709
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.