STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb48Zinc finger and BTB domain-containing protein 48. (744 aa)    
Predicted Functional Partners:
nol9
Polynucleotide 5'-hydroxyl-kinase GRC3/NOL9.
      
 0.614
stk11ip
Serine/threonine-protein kinase 11-interacting protein isoform X2.
   
    0.611
naif1
Nuclear apoptosis-inducing factor 1.
   
  
 0.602
dclre1b
DNA cross-link repair 1B protein.
    
 
 0.582
six2
S1 RNA-binding domain-containing protein 1.
    
 
 0.516
golim4
Golgi integral membrane protein 4.
      
 0.514
terf1
Telomeric repeat-binding factor 1.
    
 0.453
KDM1B
Lysine-specific histone demethylase 1B.
    
 0.442
crbn
Protein cereblon.
    
 
 0.418
terb2
Telomere repeats-binding bouquet formation protein 2 isoform X1.
      
 0.405
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.