STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acbd6Acyl-CoA-binding domain-containing protein 6 isoform X1. (299 aa)    
Predicted Functional Partners:
nmt1
Glycylpeptide N-tetradecanoyltransferase 1.
    
 
 0.629
nmt2
Glycylpeptide N-tetradecanoyltransferase 2.
    
 
 0.629
tmem53
Transmembrane protein 53.
      
 0.612
LOC104930356
Aspartate beta-hydroxylase domain-containing protein 2.
   
  
 0.612
acox1
Peroxisomal acyl-coenzyme A oxidase 1 isoform X1.
   
 0.595
acox3
acyl-CoA oxidase 3, pristanoyl.
   
 0.572
acaa1
3-ketoacyl-CoA thiolase, peroxisomal.
   
 
 0.551
igsf8
Immunoglobulin superfamily, member 8.
      
 0.522
hadhb
Trifunctional enzyme subunit beta, mitochondrial.
   
 
 0.512
polr3k
DNA-directed RNA polymerase III subunit RPC10.
      
 0.505
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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