STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104920463L-lactate dehydrogenase A chain. (386 aa)    
Predicted Functional Partners:
got2
Aspartate aminotransferase, mitochondrial.
   
 0.976
LOC109140894
Pyruvate kinase PKM.
  
 0.973
LOC104925043
Pyruvate kinase PKM isoform X1.
  
 0.973
got1
Aspartate aminotransferase, cytoplasmic.
   
 0.970
LOC109137396
Aspartate aminotransferase, cytoplasmic isoform X1.
   
 0.970
LOC104930034
Aspartate aminotransferase, cytoplasmic.
   
 0.970
pc
Pyruvate carboxylase, mitochondrial.
  
 0.966
LOC104935691
Malate synthase-like.
  
 0.960
me3
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.942
me1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 0.942
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.