STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104926716Sodium/bile acid cotransporter-like. (337 aa)    
Predicted Functional Partners:
LOC104938020
Cholesterol 7-alpha-monooxygenase.
   
  
 0.518
otc
Ornithine carbamoyltransferase, mitochondrial.
   
  
 0.495
bloc1s6
Biogenesis of lysosome-related organelles complex 1 subunit 6.
    
 0.459
plekhd1
Pleckstrin homology domain-containing family D member 1.
      
 0.451
slc10a7
Solute carrier family 10 (sodium/bile acid cotransporter), member 7.
      
 0.447
bloc1s1
Biogenesis of lysosome-related organelles complex 1 subunit 1.
     
 0.444
abcc2
ATP-binding cassette, subfamily C (CFTR/MRP), member 2.
   
  
 0.438
sord
L-iditol 2-dehydrogenase.
  
  
 0.436
nr1h4
Bile acid receptor isoform X1.
   
  
 0.430
serpind1
Heparin cofactor II.
   
    0.426
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.