STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104925475Slit homolog 3 protein. (1539 aa)    
Predicted Functional Partners:
LOC104919838
Roundabout, axon guidance receptor 1.
   
 0.759
LOC104920036
Roundabout, axon guidance receptor 1.
   
 0.759
robo2
Roundabout, axon guidance receptor 2.
   
 0.691
LOC104920035
Roundabout, axon guidance receptor 2.
   
 0.691
robo4
Roundabout, axon guidance receptor 4.
   
 0.678
LOC104928939
Roundabout homolog 2-like isoform X1.
   
 0.670
ENSLCRP00005061268
annotation not available
   
 0.670
adgrl1
Adhesion G protein-coupled receptor L1 isoform X1.
   
 
 0.603
LOC104931535
Adhesion G protein-coupled receptor L2.
   
 
 0.603
adgrl2
Adhesion G protein-coupled receptor L2 isoform X1.
   
 
 0.603
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.