STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104931439Receptor-type tyrosine-protein phosphatase F isoform X3. (1908 aa)    
Predicted Functional Partners:
LOC104926189
Insulin receptor isoform X1.
    
  0.937
lrrc4b
Leucine-rich repeat-containing protein 4B.
    
 0.934
LOC104928105
Catenin beta 1.
   
 0.920
LOC104929883
Insulin receptor substrate 2 isoform X1.
    
  0.909
LOC104923989
Insulin receptor substrate 1-B.
    
  0.909
LOC104938872
Insulin receptor substrate 2-B.
    
  0.909
Irs2
Insulin receptor substrate 2.
    
  0.909
LOC104922057
Catenin beta 1.
   
 0.908
LOC104940290
Receptor-type tyrosine-protein phosphatase F isoform X1.
  
  
 
0.900
IL1RAP
Interleukin 1 receptor accessory protein.
    
 0.712
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.