STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paoxPeroxisomal N(1)-acetyl-spermine/spermidine oxidase. (511 aa)    
Predicted Functional Partners:
tysnd1
Peroxisomal leader peptide-processing protease.
     
 0.707
amd1
S-adenosylmethionine decarboxylase proenzyme.
      
 0.615
SAT1
Diamine N-acetyltransferase.
      
 0.615
pex12
Peroxisome assembly protein 12.
     
 0.599
LOC104936150
SUMO-conjugating enzyme UBC9-like.
    
  0.598
ube2i
Ubiquitin-conjugating enzyme E2 I.
    
  0.598
pex10
Peroxisome biogenesis factor 10.
     
 0.595
pex14
Peroxisomal membrane protein PEX14 isoform X1.
     
 0.594
scp2
Non-specific lipid-transfer protein.
   
 
 0.590
ENSLCRP00005009032
annotation not available
   
 
 0.590
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.