STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd1Ankyrin repeat domain-containing protein 1. (313 aa)    
Predicted Functional Partners:
ENSLCRP00005021964
annotation not available
  
   
 0.484
ift81
Intraflagellar transport protein 81 homolog.
    
 0.479
ENSLCRP00005010502
Uncharacterized protein LOC113746864.
  
     0.473
ift22
Intraflagellar transport protein 22 homolog.
    
 0.461
ift88
Intraflagellar transport 88.
   
 0.450
relb
Transcription factor RelB isoform X1.
   
 0.447
rel
C-Rel proto-oncogene protein.
   
 0.447
LOC109141199
Putative transcription factor p65 homolog isoform X1.
   
 0.447
ift52
Intraflagellar transport protein 52 homolog.
    
 0.445
LOC104929527
Protein phosphatase 1 regulatory subunit 27.
  
    0.438
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.