STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104920224Chymotrypsin-like elastase family member 2A isoform X1. (265 aa)    
Predicted Functional Partners:
met
Hepatocyte growth factor receptor isoform X1.
    
 0.586
LOC104920504
Macrophage-stimulating protein receptor isoform X1.
    
 0.586
mst1r
Macrophage-stimulating protein receptor.
    
 0.586
LOC104922343
Sodium/potassium/calcium exchanger 1-like.
      
 0.520
LOC104922342
Sodium/potassium/calcium exchanger 1-like.
      
 0.520
sfxn2
Sideroflexin-2.
      
 0.519
rps10
Small subunit ribosomal protein S10e.
      
 0.519
ENSLCRP00005029456
annotation not available
    
  0.506
LOC104932554
LOW QUALITY PROTEIN: complement C1r-A subcomponent-like.
  
     0.458
mthfd2
Methylenetetrahydrofolate dehydrogenase(NAD+) / 5,10-methenyltetrahydrofolate cyclohydrolase.
      
 0.441
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.