STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104937279Aminopeptidase N. (964 aa)    
Predicted Functional Partners:
gclc
Glutamate--cysteine ligase catalytic subunit.
     
 0.925
gclm
Glutamate--cysteine ligase regulatory subunit.
   
 
  0.920
LOC104930758
Glutathione synthetase.
   
 
 0.909
chac2
Glutathione-specific gamma-glutamylcyclotransferase 2 isoform X1.
    
 0.903
ENSLCRP00005004330
N-acetyltransferase 8.
     
  0.900
LOC104921330
Glutathione-specific gamma-glutamylcyclotransferase 1-like.
    
  0.900
ggct
Gamma-glutamylcyclotransferase.
     
  0.900
chac1
Glutathione-specific gamma-glutamylcyclotransferase 1.
    
  0.900
cth
Cystathionine gamma-lyase.
  
 
 0.831
kyat1
Kynurenine--oxoglutarate transaminase 1.
  
 
 0.809
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.