STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIGD1AHIG1 domain family member 1A, mitochondrial. (92 aa)    
Predicted Functional Partners:
COX3
Cytochrome c oxidase subunit III.
    
 
 0.893
COX2
Cytochrome c oxidase subunit II.
    
 
 0.886
LOC104937958
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.818
ENSLCRP00005014111
Cytochrome c oxidase subunit 6A1.
   
 
 0.818
LOC104934486
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.818
LOC104925490
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 
 0.780
LOC104937893
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 
 0.780
cxih1orf198
Uncharacterized protein C1orf198 homolog.
   
 
 0.780
LOC104933013
Cytochrome b-c1 complex subunit 1, mitochondrial.
   
 
 0.683
pmpcb
Peptidase, mitochondrial processing beta subunit.
   
 
 0.683
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.