STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104923785Lutropin-choriogonadotropic hormone receptor isoform X1. (704 aa)    
Predicted Functional Partners:
LOC104920623
Gonadotropin subunit beta-1.
   
 0.975
cga
Glycoprotein hormones alpha chain.
   
 
 0.903
LOC104918371
Thyrotropin subunit beta.
    
 0.592
ENSLCRP00005009237
annotation not available
    
 0.592
LOC104937563
Gonadotropin subunit beta-2.
   
 0.563
hsd3b1
3beta-hydroxy-Delta5-steroid dehydrogenase / steroid Delta-isomerase.
      
 0.547
hsd17b1
17beta-estradiol 17-dehydrogenase.
      
 0.519
bmp6
Bone morphogenetic protein 6.
      
 0.515
LOC104918736
Glycoprotein hormone beta-5.
     
 0.504
gphb5
Glycoprotein hormone beta-5.
     
 0.504
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.