STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pex5Peroxisomal biogenesis factor 5. (680 aa)    
Predicted Functional Partners:
scp2
Non-specific lipid-transfer protein.
   
 0.996
ENSLCRP00005009032
annotation not available
   
 0.996
LOC109141895
Next to BRCA1 gene 1 protein isoform X1.
    
 0.974
LOC104928988
Next to BRCA1 gene 1 protein-like isoform X1.
    
 0.974
Eci2
Enoyl-CoA delta isomerase 2, mitochondrial isoform X1.
   
 0.965
hacl1
2-hydroxyacyl-CoA lyase 1.
 
  
 0.957
pex13
Peroxisome biogenesis factor 13.
   
 0.955
ephx2
Soluble epoxide hydrolase / lipid-phosphate phosphatase.
   
 0.954
pex7
Peroxisomal biogenesis factor 7 isoform X1.
    
 0.948
pex12
Peroxisome assembly protein 12.
   
 0.942
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.