STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mvdDiphosphomevalonate decarboxylase isoform X2. (403 aa)    
Predicted Functional Partners:
idi1
Isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.998
mvk
Mevalonate kinase.
 
 
 0.996
fdps
Farnesyl pyrophosphate synthase.
  
 0.993
ggps1
Geranylgeranyl diphosphate synthase, type III.
  
 0.985
pmvk
Phosphomevalonate kinase.
   
 
 0.981
hao2
Hydroxyacid oxidase 2 isoform X3.
    
 0.930
hao1
(S)-2-hydroxy-acid oxidase.
    
 0.930
hmgcs1
Hydroxymethylglutaryl-CoA synthase, cytoplasmic.
 
 
 0.919
lss
Lanosterol synthase.
  
 
 0.901
sqle
Squalene monooxygenase.
   
  
 0.867
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.