STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bean1Protein BEAN1 isoform X1. (301 aa)    
Predicted Functional Partners:
mrpl55
39S ribosomal protein L55, mitochondrial.
      
 0.608
tubgcp4
Gamma-tubulin complex component 4.
      
 0.584
pyurf
Protein preY, mitochondrial.
      
 0.582
gadd45gip1
Growth arrest and DNA damage-inducible proteins-interacting protein 1.
      
 0.518
atxn10
Ataxin-10.
      
 0.504
ccndbp1
Cyclin-D1-binding protein 1.
      
 0.487
cmtm4
CKLF-like MARVEL transmembrane domain-containing protein 4.
      
 0.449
LOC104924616
Serine/arginine-rich splicing factor 9.
      
 0.406
aagab
Alpha- and gamma-adaptin-binding protein p34.
      
 0.400
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.