STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104929090Ictacalcin. (93 aa)    
Predicted Functional Partners:
LOC104921433
AP-2 complex subunit alpha-2 isoform X2.
    
  0.683
sdf4
45 kDa calcium-binding protein.
    
 
 0.679
LOC104934175
AP-2 complex subunit mu-like.
    
  0.634
AP2M1
AP-2 complex subunit mu-A isoform X1.
    
  0.634
ykt6
Synaptobrevin homolog YKT6.
    
 0.604
ENSLCRP00005038066
annotation not available
  
  
0.603
LOC104938358
AP-1 complex subunit beta-1 isoform X1.
    
  0.580
ap1b1
AP-1 complex subunit beta-1 isoform X3.
    
  0.580
pdyn
Proenkephalin B (prodynorphin).
      
 0.569
bet1
Blocked early in transport 1.
     
 0.559
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.