STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam20aPseudokinase FAM20A. (537 aa)    
Predicted Functional Partners:
LOC104918045
Extracellular serine/threonine protein kinase FAM20C.
  
 
0.970
LOC104922908
Extracellular serine/threonine protein kinase FAM20C.
  
 
0.912
ENSLCRP00005018174
BAI1-associated protein 2-like protein 2.
  
 
0.912
PRAG1
Inactive tyrosine-protein kinase PRAG1.
      
 0.684
peak1
Pseudopodium-enriched atypical kinase 1.
      
 0.684
LOC104918840
Extracellular serine/threonine protein kinase FAM20C.
  
 
0.633
fgf23
Fibroblast growth factor 23.
     
 0.632
trrap
Transformation/transcription domain-associated protein.
      
 0.596
mbtps1
Membrane-bound transcription factor site-1 protease isoform X1.
     
 0.593
LOC113746887
Sulfhydryl oxidase 2-like.
     
 0.587
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.