STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tm9sf3Transmembrane 9 superfamily member 3. (588 aa)    
Predicted Functional Partners:
trmt6
TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6.
      
 0.580
zfpl1
Zinc finger protein-like 1.
      
 0.580
mrpl16
39S ribosomal protein L16, mitochondrial.
      
 0.537
cers1
Ceramide synthase 1 isoform X1.
 
      0.530
fbxo8
F-box only protein 8.
      
 0.514
hspa13
Stress 70 protein chaperone microsome-associated 60kDa protein.
   
  
 0.462
ift74
Intraflagellar transport protein 74 homolog.
      
 0.445
tmem205
Transmembrane protein 205.
      
 0.439
gramd1c
GRAM domain-containing protein 1C isoform X2.
      
 0.435
LOC104933119
Transmembrane emp24 domain-containing protein 7.
   
  
 0.419
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.