STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fa2h4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase. (479 aa)    
Predicted Functional Partners:
coasy
Phosphopantetheine adenylyltransferase / dephospho-CoA kinase.
      
 0.693
suox
Sulfite oxidase, mitochondrial.
      
 0.693
cwc25
Pre-mRNA-splicing factor CWC25 homolog.
      
 0.668
sf3a3
Splicing factor 3A subunit 3.
      
 0.668
ch25h
Cholesterol 25-hydroxylase.
   
 
 0.644
ENSLCRP00005018062
Cholesterol 25-hydroxylase-like protein.
   
 
 0.644
ENSLCRP00005026964
Cholesterol 25-hydroxylase-like protein 2.
   
 
 0.644
msmo1
Methylsterol monooxygenase 1.
   
 
 0.644
LOC104917877
Cholesterol 25-hydroxylase-like protein 1, member 2.
   
 
 0.644
ENSLCRP00005054972
Cholesterol 25-hydroxylase-like protein 1, member 1.
   
 
 0.644
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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