STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cacul1CDK2-associated and cullin domain-containing protein 1. (341 aa)    
Predicted Functional Partners:
ubxn7
UBX domain-containing protein 7.
   
 0.987
skp1
S-phase kinase-associated protein 1.
   
 0.929
LOC104934047
F-box/WD repeat-containing protein 11.
   
 0.919
skp2
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2).
    
 0.880
LOC104931175
Lysine-specific demethylase 2B.
    
 0.855
LOC104917865
F-box and leucine-rich repeat protein 10/11.
    
 0.855
kdm2a
F-box and leucine-rich repeat protein 10/11.
    
 0.855
LOC104933677
Lysine-specific demethylase 2A-like.
    
 0.855
gps1
COP9 signalosome complex subunit 1 isoform X2.
    
 0.855
ENSLCRP00005060244
annotation not available
    
 0.855
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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