STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104937329Retinal guanylyl cyclase 2. (1153 aa)    
Predicted Functional Partners:
LOC104935368
Ectonucleotide pyrophosphatase/phosphodiesterase family member 1/3.
     
 0.906
nudt2
Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical].
     
 0.905
itpa
Inosine triphosphate pyrophosphatase.
    
  0.900
LOC104940045
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
   
 
 0.786
guca1b
Guanylyl cyclase-activating protein 2.
   
 0.782
PDE6C
Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha'-like.
   
 0.771
LOC104932515
Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' isoform X2.
   
 0.771
LOC104928953
Guanylyl cyclase-activating protein 3.
   
 0.769
LOC104934241
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha isoform X1.
   
 0.757
nppc
C-type natriuretic peptide.
    
 0.750
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.