STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp2caProtein phosphatase 2 catalytic subunit alpha. (310 aa)    
Predicted Functional Partners:
LOC104918016
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform.
   
 0.966
lcmt1
[phosphatase 2A protein]-leucine-carboxy methyltransferase.
    
 0.918
ppme1
Protein phosphatase methylesterase 1.
    
 0.913
igbp1
Immunoglobulin-binding protein 1.
    
 
 0.910
ppp2r5b
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform.
   
 0.901
ppp2r5a
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1.
   
 0.882
LOC104932261
Protein phosphatase methylesterase 1 isoform X1.
    
 0.869
bub1b
Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
    
 0.866
LOC104924230
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X2.
   
 0.863
LOC104921711
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform.
   
 0.863
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.