STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tpcn2Two pore calcium channel protein 2 isoform X1. (732 aa)    
Predicted Functional Partners:
UNC79
Protein unc-79 homolog isoform X8.
   
 0.991
tpcn1
Two pore calcium channel protein 1 isoform X2.
    
0.928
LOC104933795
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1.
     
 0.902
LOC104933803
ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1-like.
     
  0.900
wdr35
WD repeat-containing protein 35 isoform X1.
    
 0.686
IFT122
Intraflagellar transport protein 122 homolog isoform X1.
   
 0.675
nadsyn1
Glutamine-dependent NAD(+) synthetase.
 
 
  
 0.672
wdr19
WD repeat-containing protein 19.
    
 0.663
ift140
Intraflagellar transport protein 140 homolog isoform X1.
    
 0.662
slc24a5
Solute carrier family 24 (sodium/potassium/calcium exchanger), member 5.
   
  
 0.594
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.