STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113747111Ribonuclease kappa-A. (99 aa)    
Predicted Functional Partners:
atp6ap2
Renin receptor.
   
 
 0.871
atp6v1a
V-type proton ATPase catalytic subunit A.
   
 
 0.867
LOC104924474
V-type proton ATPase subunit d 1.
   
 
 0.856
LOC104937366
V-type H+-transporting ATPase subunit G.
    
   0.850
atp6v1d
V-type H+-transporting ATPase subunit D.
    
   0.850
atp6v0b
V-type H+-transporting ATPase 21kDa proteolipid subunit.
   
   0.844
meak7
TLD domain-containing protein 1.
    
 
 0.799
atp6v1f
V-type H+-transporting ATPase subunit F.
   
   0.790
atp6ap1
V-type H+-transporting ATPase S1 subunit.
    
 
 0.773
LOC104923868
V-type H+-transporting ATPase S1 subunit.
    
 
 0.773
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.