STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcc12ATP-binding cassette, subfamily C (CFTR/MRP), member 12. (1378 aa)    
Predicted Functional Partners:
katnal2
Katanin p60 ATPase-containing subunit A-like 2.
  
 0.562
gopc
Golgi-associated PDZ and coiled-coil motif-containing protein isoform X1.
   
 0.469
usp10
Ubiquitin carboxyl-terminal hydrolase 10 isoform X1.
    
  0.455
derl1
Derlin-1.
    
 0.431
kcnj5
Potassium inwardly-rectifying channel subfamily J member 5.
   
 0.428
LOC104934824
Potassium inwardly-rectifying channel subfamily J member 8.
   
 0.428
kcnj11
Potassium inwardly-rectifying channel subfamily J member 11.
   
 0.420
LOC104918977
G protein-activated inward rectifier potassium channel 3.
   
 0.415
KCNJ6
Potassium inwardly-rectifying channel subfamily J member 6.
   
 0.415
park7
Protein/nucleic acid deglycase DJ-1.
  
 0.415
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.