STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005058510Membrane protein FAM174B. (151 aa)    
Predicted Functional Partners:
LOC104921692
LysM and putative peptidoglycan-binding domain-containing protein 4.
      
 0.684
nudt8
Nucleoside diphosphate-linked moiety X motif 8 isoform X1.
      
 0.571
pdxp
Pyridoxal phosphate phosphatase.
      
 0.511
xxylt1
Xylosyl alpha-1,3-xylosyltransferase.
      
 0.489
lysmd3
LysM and putative peptidoglycan-binding domain-containing protein 3.
      
 0.485
leo1
RNA polymerase-associated protein LEO1.
      
 0.479
tbc1d16
TBC1 domain family member 16.
      
 0.473
LOC104924158
Protein FAM124B isoform X1.
      
 0.440
nup50
Nuclear pore complex protein Nup50.
      
 0.439
lysmd2
LysM and putative peptidoglycan-binding domain-containing protein 2.
      
 0.403
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.