STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpkowG patch domain and KOW motifs-containing protein. (537 aa)    
Predicted Functional Partners:
dhx16
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16.
    
 0.997
dhx38
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1.
   
 0.971
bud13
BUD13 homolog.
   
 
 0.933
Ak8
Adenylate kinase 8.
   
 
 0.914
cwc27
CWC27 spliceosome associated cyclophilin.
    
 0.904
prpf8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.891
cwc22
Pre-mRNA-splicing factor CWC22 homolog isoform X1.
    
 0.886
rnf113a
E3 ubiquitin-protein ligase RNF113A.
   
  0.868
ppil2
RING-type E3 ubiquitin-protein ligase PPIL2.
    
 0.862
Armc7
Armadillo repeat-containing protein 7.
   
   0.859
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.