STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thoc6THO complex 6. (327 aa)    
Predicted Functional Partners:
thoc1
THO complex subunit 1 isoform X1.
    
 0.991
thoc5
THO complex subunit 5 homolog.
   
 0.990
thoc7
THO complex subunit 7 homolog.
    
 0.984
thoc2
THO complex subunit 2 isoform X2.
    
 0.984
LOC104937725
THO complex subunit 3.
   
 0.984
zc3h13
Zinc finger CCCH domain-containing protein 13.
    
 0.954
alyref
THO complex subunit 4.
   
 0.918
LOC104931065
Spliceosome RNA helicase DDX39B isoform X1.
   
 0.870
LOC104926536
ATP-dependent RNA helicase DDX39A.
   
 0.870
DDX39A
ATP-dependent RNA helicase DDX39A-like.
   
 0.870
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.