STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
miga1Mitoguardin 1. (596 aa)    
Predicted Functional Partners:
nexn
Nexilin isoform X1.
 
   
 0.796
miga2
Mitoguardin 2 isoform X1.
  
 
 
0.691
piga
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X1.
      
 0.683
Ak9
Adenylate/nucleoside-diphosphate kinase.
      
 0.621
zzz3
ZZ-type zinc finger-containing protein 3.
      
 0.583
immt
MICOS complex subunit MIC60.
      
 0.582
mfsd6
Major facilitator superfamily domain-containing protein 6 isoform X1.
      
 0.578
wdr20
WD repeat-containing protein 20.
    
 
 0.571
LOC104924181
Adenylate kinase isoenzyme 1 isoform X2.
      
 0.569
surf6
Surfeit locus protein 6.
     
 0.567
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.