STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrp15,6-dihydroxyindole-2-carboxylic acid oxidase. (521 aa)    
Predicted Functional Partners:
dct
L-dopachrome tautomerase.
  
 
 
0.920
LOC104930927
5,6-dihydroxyindole-2-carboxylic acid oxidase.
  
 
 
0.912
LOC104932011
Melanocyte protein PMEL.
   
  
 0.679
MLANA
Melanoma antigen recognized by T-cells 1.
   
  
 0.639
slc24a5
Solute carrier family 24 (sodium/potassium/calcium exchanger), member 5.
   
  
 0.601
oca2
P protein.
   
  
 0.596
RDH13
Retinol dehydrogenase 13.
    
 
 0.549
nodal
Nodal homolog.
    
 0.534
LOC104920316
Nodal homolog.
    
 0.534
LOC104920104
Nodal homolog 2-A.
    
 0.534
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.