STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znf507Zinc finger protein 507. (1161 aa)    
Predicted Functional Partners:
ints5
Integrator complex subunit 5.
    
 
 0.595
PAQR9
Membrane progestin receptor epsilon.
    
 
 0.589
get4
Golgi to ER traffic protein 4 homolog.
      
 0.586
rnf152
E3 ubiquitin-protein ligase RNF152.
   
 0.585
dnajc11
DnaJ homolog subfamily C member 11.
    
 0.583
C1orf146
Uncharacterized protein C1orf146 homolog isoform X3.
   
 
 0.444
LOC109140545
DnaJ homolog subfamily C member 11.
    
 0.418
ddias
DNA damage-induced apoptosis suppressor protein.
  
     0.417
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.