STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104919296Forkhead box protein A2, hepatocyte nuclear factor 3-beta. (414 aa)    
Predicted Functional Partners:
pgr
Progesterone receptor.
    
 0.620
gata4
GATA binding protein 4.
    
 0.620
gata6
Transcription factor GATA-6.
    
 0.620
nrip1
Nuclear receptor-interacting protein 1.
     
 0.614
LOC104929436
Gonadotropin-releasing hormone.
      
 0.606
LOC104933019
GATA-binding factor 2 isoform X2.
    
 0.599
GATA2
Endothelial transcription factor GATA-2 isoform X1.
    
 0.599
gata3
Trans-acting T-cell-specific transcription factor GATA-3 isoform X1.
    
 0.599
gata5
Transcription factor GATA-5.
    
 0.560
chrd
Chordin.
   
  
 0.550
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.