STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tubgcp3Gamma-tubulin complex component 3. (935 aa)    
Predicted Functional Partners:
tubg1
Tubulin gamma-1 chain.
   
 0.998
tubgcp2
Gamma-tubulin complex component 2.
   
0.998
tubgcp5
Gamma-tubulin complex component 5.
    
0.995
tubgcp4
Gamma-tubulin complex component 4.
   
0.991
tubgcp6
Gamma-tubulin complex component 6 isoform X1.
   
0.981
tubd1
Tubulin delta chain isoform X1.
   
 0.929
LOC109142996
Mitotic-spindle organizing protein 2 isoform X2.
    
 0.869
nedd1
NEDD1 gamma-tubulin ring complex targeting factor.
    
 0.865
LOC104921178
Pentatricopeptide repeat-containing protein 1, mitochondrial.
   
 0.791
dnmt1
DNA (cytosine-5)-methyltransferase 1.
   
 0.791
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.