STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104919933[histone H3]-trimethyl-L-lysine4 demethylase. (1554 aa)    
Predicted Functional Partners:
atp5f1d
F-type H+-transporting ATPase subunit delta.
  
 0.922
ATP6
F-type H+-transporting ATPase subunit a.
  
 0.918
atp5po
F-type H+-transporting ATPase subunit O.
  
 0.918
ATP5F1A
F-type H+-transporting ATPase subunit alpha.
  
 0.849
LOC104922468
ATP synthase subunit alpha, mitochondrial.
  
 0.849
atp5f1c
ATP synthase subunit gamma, mitochondrial isoform X2.
  
 0.849
ENSLCRP00005035228
ATP synthase F1 subunit gamma.
  
 0.849
atp5pb
ATP synthase F(0) complex subunit B1, mitochondrial.
   
 0.835
atp5f1e
F-type H+-transporting ATPase subunit epsilon.
    
 0.795
ENSLCRP00005028308
ATP synthase peripheral stalk subunit d.
   
 0.794
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.