STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl2239S ribosomal protein L22, mitochondrial. (208 aa)    
Predicted Functional Partners:
mrpl20
39S ribosomal protein L20, mitochondrial.
   
 
 0.999
fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.999
mrps9
28S ribosomal protein S9, mitochondrial isoform X1.
  
 
 0.999
mrpl27
39S ribosomal protein L27, mitochondrial.
   
 
 0.999
mrpl13
39S ribosomal protein L13, mitochondrial.
  
 0.999
mrpl19
39S ribosomal protein L19, mitochondrial.
   
 
 0.999
mrpl17
39S ribosomal protein L17, mitochondrial.
  
 
 0.999
mrps6
28S ribosomal protein S6, mitochondrial.
   
 
 0.999
rpl23
Large subunit ribosomal protein L23e.
  
 0.999
mrpl36
39S ribosomal protein L36, mitochondrial.
  
 
 0.999
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.