STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104933928Coatomer subunit beta. (926 aa)    
Predicted Functional Partners:
copb1
Coatomer subunit beta.
   
 0.995
arcn1
Coatomer subunit delta.
   
 0.991
copa
Coatomer subunit alpha.
   
0.990
copg2
Coatomer subunit gamma-2.
   
 0.984
cope
Coatomer protein complex subunit epsilon.
   
 0.977
arfgap3
ADP-ribosylation factor GTPase-activating protein 3 isoform X1.
   
 0.916
arfgap2
ADP-ribosylation factor GTPase-activating protein 2 isoform X1.
   
 0.916
eprs1
Bifunctional glutamate/proline--tRNA ligase isoform X1.
   
  
 0.902
LOC104932141
Coatomer subunit zeta-1.
   
 0.864
LOC104930757
Proline-rich protein 15-like protein A.
   
 0.846
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.