STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005064570annotation not available (1991 aa)    
Predicted Functional Partners:
dcn
Decorin.
     
 0.501
grip1
Glutamate receptor-interacting protein 1 isoform X1.
    
 
 0.469
SDC4
Syndecan-4 isoform X2.
     
 0.444
LOC104927056
Platelet-derived growth factor receptor beta.
   
 
 0.437
csgalnact2
Chondroitin sulfate N-acetylgalactosaminyltransferase 1/2.
     
 0.425
bcan
Brevican core protein isoform X1.
     
 0.423
LOC104927582
Brevican core protein-like.
     
 0.423
hspg2
Heparan sulfate proteoglycan 2.
   
 
0.418
chsy1
Chondroitin sulfate synthase 1.
     
 0.414
chsy3
Chondroitin sulfate synthase 3.
     
 0.414
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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