STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104922887Sperm-associated antigen 8 isoform X1. (186 aa)    
Predicted Functional Partners:
cfap126
Protein Flattop isoform X1.
   
 
 0.860
wdr90
WD repeat domain 90.
    
   0.858
tekt3
Tektin-3.
   
   0.856
ccdc173
Coiled-coil domain-containing protein 173.
  
 
   0.802
efhc2
EF-hand domain-containing family member C2 isoform X1.
   
   0.783
efhc1
EF-hand domain-containing protein 1.
   
   0.772
cfap52
Cilia- and flagella-associated protein 52.
   
   0.766
cxvh1orf194
Uncharacterized protein C1orf194 homolog.
   
   0.765
pacrg
Parkin coregulated gene protein isoform X2.
    
 
 0.761
cfap20
Cilia- and flagella-associated protein 20.
    
   0.759
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.