STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104922722Neuromedin U receptor 1. (424 aa)    
Predicted Functional Partners:
nmu
Neuromedin-U isoform X1.
    
 0.987
nts
Neurotensin.
    
 0.650
LOC104939271
Endothelin-1.
    
 0.543
LOC109140413
Endothelin-1 isoform X1.
    
  0.528
LOC104926797
Proenkephalin A.
    
 0.515
gal
Galanin peptides isoform X1.
    
 0.494
LOC104921513
Prepronociceptin.
    
  0.494
LOC104925175
Angiotensin II receptor type 2.
  
  
 
0.487
apln
Apelin.
     
 0.467
f2
Coagulation factor II (thrombin).
    
  0.461
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.