STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104928480Ephrin-A5b. (229 aa)    
Predicted Functional Partners:
LOC104920494
Ephrin type-A receptor 2.
   
 0.943
LOC104927144
Ephrin type-A receptor 2 isoform X1.
   
 0.943
epha8
Ephrin type-A receptor 8 isoform X1.
   
 0.756
ntrk1
Neurotrophic tyrosine kinase receptor type 1.
    
 0.748
met
Hepatocyte growth factor receptor isoform X1.
   
 0.741
igf1r
Insulin-like growth factor 1 receptor.
    
 0.707
LOC104926189
Insulin receptor isoform X1.
    
 0.707
fgfr1
Fibroblast growth factor receptor 1 isoform X4.
     
 0.684
fgfr3
Fibroblast growth factor receptor 3 isoform X6.
     
 0.671
fgfr4
Fibroblast growth factor receptor 4.
     
 0.671
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.