STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspoTranslocator protein. (161 aa)    
Predicted Functional Partners:
vdac1
Voltage-dependent anion-selective channel protein 1.
   
 
 0.714
LOC109141895
Next to BRCA1 gene 1 protein isoform X1.
      
 0.692
LOC104928988
Next to BRCA1 gene 1 protein-like isoform X1.
      
 0.692
star
Steroidogenic acute regulatory protein, mitochondrial isoform X2.
      
 0.686
acbd3
acyl-CoA binding domain containing 3.
      
 0.684
LOC104931649
RIMS-binding protein 2.
    
 0.652
rimbp2
RIMS-binding protein 2 isoform X1.
    
 0.652
ENSLCRP00005034483
annotation not available
    
 0.652
LOC104925971
RIMS-binding protein 2 isoform X1.
    
 0.652
l3hypdh
Trans-3-hydroxy-L-proline dehydratase.
   
    0.651
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.