STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idi1Isopentenyl-diphosphate Delta-isomerase 1. (288 aa)    
Predicted Functional Partners:
mvd
Diphosphomevalonate decarboxylase isoform X2.
  
 
 0.998
fdps
Farnesyl pyrophosphate synthase.
 
 
 0.993
ggps1
Geranylgeranyl diphosphate synthase, type III.
  
 
 0.983
lss
Lanosterol synthase.
  
 
 0.979
hmgcs1
Hydroxymethylglutaryl-CoA synthase, cytoplasmic.
  
  
 0.964
coq2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
  
 
 0.961
sqle
Squalene monooxygenase.
   
  
 0.931
dhdds
Dehydrodolichyl diphosphate synthase complex subunit DHDDS.
  
 
 0.924
nus1
Dehydrodolichyl diphosphate synthase complex subunit NUS1.
  
 
 0.923
mthfr
Methylenetetrahydrofolate reductase (NADPH).
     
 0.875
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.