STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005065466Uncharacterized protein LOC104924046. (423 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer-binding factor 2.
   
 
 0.544
taf6l
TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L.
   
  
 0.509
LOC104936698
Runt-related transcription factor 1 isoform X1.
    
  0.493
LOC104930001
Runt-related transcription factor 2 isoform X2.
    
  0.493
runx3
Runt-related transcription factor 3 isoform X2.
    
  0.493
hnrnpk
Heterogeneous nuclear ribonucleoprotein K isoform X1.
   
 
 0.485
LOC104922479
LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K.
   
 
 0.485
snrpd2
Small nuclear ribonucleoprotein Sm D2.
   
   0.481
LOC104920240
Heterogeneous nuclear ribonucleoprotein M isoform X1.
   
 
 0.469
alyref
THO complex subunit 4.
   
  
 0.460
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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