STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLCRP00005065727CD109 molecule. (1171 aa)    
Predicted Functional Partners:
rnf2
E3 ubiquitin-protein ligase RING2 isoform X2.
    
 0.590
RING1
E3 ubiquitin-protein ligase RING2-A isoform X1.
    
 0.590
pcgf2
Polycomb group ring finger 2.
    
 0.578
LOC113747116
Chromobox protein homolog 8-like.
    
 0.578
bmi1
BMI1 proto-oncogene, polycomb ring finger.
    
 0.578
cbx8
Chromobox protein homolog 8.
    
 0.578
CBX2
Chromobox protein homolog 2 isoform X2.
    
 0.563
cfi
Complement factor I.
   
 0.558
SCML2
Sex comb on midleg-like protein 2 isoform X1.
    
 0.551
SCMH1
Polycomb protein SCMH1 isoform X4.
    
 0.551
Your Current Organism:
Larimichthys crocea
NCBI taxonomy Id: 215358
Other names: L. crocea, Pseudosciaena amblyceps, Pseudosciaena crocea, Sciaena crocea, croceine croaker, large yellow croaker
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.