STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZNM3Uncharacterized protein. (63 aa)    
Predicted Functional Partners:
A0A4P9ZRF9
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.987
A0A4P9ZTM7
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 0.939
A0A4P9ZR15
Nucleotide excision repair TFIIH subunit.
    
 0.830
A0A4P9ZLX5
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.828
A0A4P9ZN30
Non-histone chromosomal protein 6.
    
 0.818
A0A4P9ZVB4
High mobility group box domain-containing protein.
    
 0.818
A0A4V1J482
Non-histone chromosomal protein 6.
    
 0.818
A0A4V1J514
HMG box domain-containing protein.
    
 0.753
A0A4P9ZMH7
P-loop containing nucleoside triphosphate hydrolase protein.
   
  
 0.726
A0A4P9ZTF6
ClpS-like protein.
   
 
 0.611
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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