STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZSI9P-loop containing nucleoside triphosphate hydrolase protein. (642 aa)    
Predicted Functional Partners:
A0A4P9ZP46
TPR_REGION domain-containing protein.
   
 0.952
A0A4P9ZK99
PRP8 domain IV core-domain-containing protein.
   
 0.951
A0A4P9ZYW6
116 kDa U5 small nuclear ribonucleo protein-like protein component.
   
 0.949
A0A4P9ZYX4
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.937
A0A4P9ZW95
Small nuclear ribonucleoprotein Sm D2.
    
 0.932
A0A4P9ZW08
Small nuclear ribonucleoprotein Sm D3.
   
 0.928
A0A4P9ZXB0
Small nuclear ribonucleoprotein G.
    
 0.927
A0A4P9ZWF5
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
 0.925
A0A4P9ZSP6
Sm domain-containing protein.
    
 0.924
A0A4Q0A2G4
SART-1 protein.
   
 0.922
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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