STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4P9ZT42Peptidase S8/S53 domain-containing protein; Belongs to the peptidase S8 family. (879 aa)    
Predicted Functional Partners:
A0A4P9ZS81
Uncharacterized protein.
    
 0.701
A0A4Q0A2G5
Golgin subfamily A member 7/ERF4.
    
 0.675
A0A4P9ZVY8
AAA_23 domain-containing protein.
    
 0.634
A0A4P9ZZ29
Meiotic recombination protein; Belongs to the MRE11/RAD32 family.
    
  0.626
A0A4P9ZQ30
Uncharacterized protein.
    
 0.559
A0A4P9ZVY2
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
 0.550
A0A4P9ZQB7
Small GTPase superfamily.
    
 0.543
A0A4P9ZTH1
Ras-like protein 3.
    
 0.543
A0A4P9ZUC1
Ras family-domain-containing protein.
    
 0.543
A0A4Q0A103
Complex.
    
 0.543
Your Current Organism:
Dimargaris cristalligena
NCBI taxonomy Id: 215637
Other names: D. cristalligena
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