A0A4P9ZU36 protein (Dimargaris cristalligena)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4P9ZU36

Kinase-like domain-containing protein. (519 aa)

Predicted Functional Partners:

A0A4P9ZU56

0.985

A0A4P9ZS10

0.972

A0A4P9ZXU3

0.970

A0A4P9ZQ80

0.963

A0A4Q0A0J3

0.956

A0A4P9ZZ42

0.948

A0A4P9ZVD5

0.939

A0A4Q0A2S2

0.939

A0A4P9ZTV0

0.938

A0A4P9ZTM2

0.936

Your Current Organism:

Dimargaris cristalligena

NCBI taxonomy Id: 215637
Other names: D. cristalligena

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4P9ZQ80	A0A4P9ZS10	Rab-GTPase-TBC domain-containing protein.	Uncharacterized protein.	0.451
A0A4P9ZQ80	A0A4P9ZTM2	Rab-GTPase-TBC domain-containing protein.	GTPase Spg1.	0.997
A0A4P9ZQ80	A0A4P9ZU36	Rab-GTPase-TBC domain-containing protein.	Kinase-like domain-containing protein.	0.963
A0A4P9ZS10	A0A4P9ZQ80	Uncharacterized protein.	Rab-GTPase-TBC domain-containing protein.	0.451
A0A4P9ZS10	A0A4P9ZTV0	Uncharacterized protein.	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	0.855
A0A4P9ZS10	A0A4P9ZU36	Uncharacterized protein.	Kinase-like domain-containing protein.	0.972
A0A4P9ZS10	A0A4P9ZVD5	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.850
A0A4P9ZS10	A0A4P9ZXU3	Uncharacterized protein.	Rad21/Rec8-like protein.	0.959
A0A4P9ZS10	A0A4P9ZZ42	Uncharacterized protein.	Kinase-like domain-containing protein.	0.506
A0A4P9ZS10	A0A4Q0A0J3	Uncharacterized protein.	Structural maintenance of chromosomes protein.	0.938
A0A4P9ZS10	A0A4Q0A2S2	Uncharacterized protein.	WD40-repeat-containing domain protein.	0.850
A0A4P9ZTM2	A0A4P9ZQ80	GTPase Spg1.	Rab-GTPase-TBC domain-containing protein.	0.997
A0A4P9ZTM2	A0A4P9ZU36	GTPase Spg1.	Kinase-like domain-containing protein.	0.936
A0A4P9ZTM2	A0A4P9ZU56	GTPase Spg1.	Uncharacterized protein.	0.998
A0A4P9ZTM2	A0A4P9ZVD5	GTPase Spg1.	WD40-repeat-containing domain protein.	0.430
A0A4P9ZTM2	A0A4Q0A2S2	GTPase Spg1.	WD40-repeat-containing domain protein.	0.430
A0A4P9ZTV0	A0A4P9ZS10	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.855
A0A4P9ZTV0	A0A4P9ZU36	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Kinase-like domain-containing protein.	0.938
A0A4P9ZTV0	A0A4P9ZVD5	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	WD40-repeat-containing domain protein.	0.907
A0A4P9ZTV0	A0A4P9ZXU3	Kinase-like domain-containing protein; Belongs to the protein kinase superfamily.	Rad21/Rec8-like protein.	0.559